BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C12LP1|AL428528
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig974 1678 0.0
>3x_Contig974
Length = 4780
Score = 1678 bits (845), Expect = 0.0
Identities = 854/857 (99%), Gaps = 1/857 (0%)
Strand = Plus / Plus
Query: 1 agctctcttagtttctgcccatttttcacctagacccaattgttgggcttggaataacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2296 agctctcttagtttctgcccatttttcacctagacccaattgttgggcttggaataacaa 2355
Query: 61 gttggtcaattggccacctggaatttcgtggacgtaaacttctggatcaggacccttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2356 gttggtcaattggccacctggaatttcgtggacgtaaacttctggatcaggacccttcaa 2415
Query: 121 atcagcttcgaaacaagagtatagcaatctcatctcagcccagtaggcatctaattcacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2416 atcagcttcgaaacaagagtatagcaatctcatctcagcccagtaggcatctaattcacg 2475
Query: 181 aacgtaaccaacgttgacgttgttgtcgatttcgccgtccaaagcagctagcaaagcgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2476 aacgtaaccaacgttgacgttgttgtcgatttcgccgtccaaagcagctagcaaagcgtt 2535
Query: 241 aatagatggttgagaagtcaaaccagacatggagttggtagcgacgtcaacaacatctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2536 aatagatggttgagaagtcaaaccagacatggagttggtagcgacgtcaacaacatctgc 2595
Query: 301 accggagagagcgcaagcagccatagaggcaacaccagtaccagctgaatcgtgagtgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2596 accggagagagcgcaagcagccatagaggcaacaccagtaccagctgaatcgtgagtgtg 2655
Query: 361 aacgtggattggcaattcagggtacttagctctgatcgaaccaatcaataacctggcagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2656 aacgtggattggcaattcagggtacttagctctgatcgaaccaatcaataacctggcagc 2715
Query: 421 agaaggcttcaaagtaccagccatatccttgatacctaawatgtgagtaccactgttgac 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2716 agaaggcttcaaagtaccagccatatccttgatacctaaaatgtgagtaccactgttgac 2775
Query: 481 aatcttttcggtaatgtctaagtwataatccaagttgtactttttgcctggggccaacat 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2776 aatcttttcggtaatgtctaagtaataatccaagttgtactttttgcctggggccaacat 2835
Query: 541 gtcaccagagtaacagatggtagcttcaacaacaccaccagccttcttgacagcgtcgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2836 gtcaccagagtaacagatggtagcttcaacaacaccaccagccttcttgacagcgtcgac 2895
Query: 601 accaactttcaattgttctaaatcgtttagagcatcgaaaactctgaaaatatcaacacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2896 accaactttcaattgttctaaatcgtttagagcatcgaaaactctgaaaatatcaacacc 2955
Query: 661 attgtccttagcttgcttgacgaagtggtcaatagcgttatctggtagagaagagtaagc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2956 attgtccttagcttgcttgacgaagtggtcaatagcgttatctggtagagaagagtaagc 3015
Query: 721 aacaccgttagcaccacgtaacaacatttggaatggaatgtttggaa-caactttcttag 779
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3016 aacaccgttagcaccacgtaacaacatttggaatggaatgtttggaaccaactttcttag 3075
Query: 780 agttctcaggcgttcccatggatcttcgtgcaagaatctcatagagacatcgaaggtggc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3076 agttctcaggcgttcccatggatcttcgtgcaagaatctcatagagacatcgaaggtggc 3135
Query: 840 accaccccaacattcta 856
|||||||||||||||||
Sbjct: 3136 accaccccaacattcta 3152
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5630
Number of Sequences: 1807
Number of extensions: 5630
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)